Bootstrap: docker
From: debian:trixie

%labels
    Author ATGC

%post
    apt-get update && apt-get install -y build-essential wget git autoconf automake libtool
    cd /opt
    git clone https://gite.lirmm.fr/atgc/FastME.git
    cd FastME
    autoreconf -fi
    ./configure
    make
    cp src/fastme /usr/local/bin/
    apt-get clean && rm -rf /var/lib/apt/lists/*

%environment
    export PATH=/usr/local/bin:$PATH

%runscript
    exec fastme "$@"