Bootstrap: docker
From: debian:trixie

%labels
    Author ATGC
    Tool PhySIC_IST

%post
    set -e
    export DEBIAN_FRONTEND=noninteractive

    dpkg --add-architecture i386
    apt-get update
    apt-get install -y --no-install-recommends \
        ca-certificates \
        git \
        libc6-i386 \
        libstdc++6:i386

    git clone --depth 1 --branch master https://gite.lirmm.fr/atgc/atgc_physic_ist.git /opt/atgc_physic_ist

    BINARY_PATH="$(find /opt/atgc_physic_ist -type f \( -name 'PhySIC_IST_Linux32' -o -name 'physic_linux' \) -print -quit)"
    if [ -z "${BINARY_PATH}" ]; then
        echo "Unable to locate PhySIC_IST executable in cloned repository." >&2
        exit 1
    fi

    cp "${BINARY_PATH}" /usr/local/bin/physic_ist
    chmod +x /usr/local/bin/physic_ist

    apt-get clean
    rm -rf /var/lib/apt/lists/*

%environment
    export PATH=/usr/local/bin:$PATH

%runscript
    exec /usr/local/bin/physic_ist "$@"